College of Agricultural Sciences Personnel Profile
Personnel Photo of Jan E Leach
Jan E Leach
Prof./Assoc. Dean for Research
University Distinguished Professor
Bioagricultural Sciences and Pest Management
College of Agricultural Sciences

Phone:
970-491-2924
Education:
  • Ph D, University of Wisconsin, Madison; Plant Pathology
  • MS, University of Nebraska Lincoln; Microbiology
  • BS, University of Nebraska Lincoln; Microbiology

Dr. Jan Leach is the Associate Dean for Research in the College of Agriculture and a University Distinguished Professor at Colorado State University. In her role as Associate Dean for Research, she provides strategic vision for research within the College, and works with faculty to build collaborative research teams. Her research group studies the molecular basis of durable plant disease resistance. Other projects in her laboratory are related to bioenergy (genetics of biomass production) and understanding the interactions of bacteria-insects-plants in plant health.

Luna, Emily , van Eck, L., Campillo, Tony, Weinroth, Margaret Dorothy, Metcalf, Jessica Lynne, Perez-Quintero, A. L., Botha, AM, Thannhauser, T., Pappin, D., Tisserat, Ned A, Lapitan, N. L. V., Argueso, Cris, Ode, Paul James, Heck, M. L., Leach, Jan E, (2018) Bacteria associated with Russian wheat aphid (Diuraphis noxia) enhance aphid virulence to wheat. Phytobiomes 2 151-164

Juanillas, VMJ, A Dereeper, N. Beaume, Droc, G., Dizon, J., Mendoza, J. R., Perdon, J. P., Mansueto, L., Triplett, Lindsay Renee, Lang, Jillian M, Zhou, G., Ratharanjan, K., Plale, B., Haga, J., Leach, Jan E, Ruiz, M., Thomson, M., Alexandrov, N., Larmande, P., Kretzschmar, T., Mauleon, R. P., (2018) Rice Galaxy: an open resource for plant science bioRxiv

Zarei, I, Luna, Emily Katrin, Leach, Jan E, McClung, A, Vilchez, S, Koita, O, Ryan, Elizabeth P, (2018) Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene⁻Bran Metabolite Relationships. Metabolites 8 4

Cohen, Stephen Philip, Jacobs, J M, Leach, Jan E, (2018) In Planta Bacterial Transcriptomics Predict Plant Disease Outcomes. Trends in plant science 23 9 751-753

Long, J J, Jahn, Courtney Elaine, Sánchez-Hidalgo, A, Wheat, William H, Jackson, M, Gonzalez-Juarrero, Mercedes, Leach, Jan E, (2018) Interactions of free-living amoebae with rice bacterial pathogens Xanthomonas oryzae pathovars oryzae and oryzicola. PloS one 13 8 e0202941

Tran, T T, Pérez-Quintero, A L, Wonni, I, Carpenter SCD, , Yu, Y, Wang, L, Leach, Jan E, Verdier, V, Cunnac, S, Bogdanove, A J, Koebnik, R, Hutin, M, Szurek, B, (2018) Functional analysis of African Xanthomonas oryzae pv. oryzae TALomes reveals a new susceptibility gene in bacterial leaf blight of rice. PLoS pathogens 14 6 e1007092

Bossa-Castro, A M, Tekete, C, Raghavan, C, Delorean, E E, Dereeper, A, Dagno, K, Koita, O, Mosquera, G, Leung, H, Verdier, V, Leach, Jan E, (2018) Allelic variation for broad-spectrum resistance and susceptibility to bacterial pathogens identified in a rice MAGIC population. Plant biotechnology journal

Langlois, Paul Aaron, Snelling, Jacob Wayne, Hamilton, John, Bragard, Claude, Koebnik, Ralph, Verdier, Valerie, Triplett, Lindsay Renee, Blom, Jochen, Tisserat, Ned A, Leach, Jan E, (2017) Characterization of the Xanthomonas translucens complex using draft genomes, comparative genomics, phylogenetic analysis, and diagnostic LAMP assays Phytopathology

Leach, Jan E, Triplett, Lindsay Renee, Argueso, Cris, Trivedi, Pankaj, (2017) Communication in the Phytobiome CELL 169 4 587-596

Cohen, Stephen Philip, Liu, Hongxia, Argues, Cristiana T., Pereira, Andy, Cruz, Casiana Vera, Verdier, Valerie, Leach, Jan E, (2017) RNA-Seq analysis reveals insight into enhanced rice Xa7-mediated bacterial blight resistance at high temperature PLOS ONE 12 11

Cohen, Stephen Philip, Liu, H, Argueso, Cris, Pereira, A, Vera Cruz, C, Verdier, V, Leach, Jan E, (2017) RNA-Seq analysis reveals insight into enhanced rice Xa7-mediated bacterial blight resistance at high temperature. PloS one 12 11 e0187625

Lang, Jillian M, DuCharme, E, Ibarra Caballero, Jorge Rafael, Luna, Emily Katrin, Hartman, T, Ortiz-Castro, M, Korus, K, Rascoe, J, Jackson-Ziems, T A, Broders, Kirk Dale, Leach, Jan E, (2017) Detection and Characterization of Xanthomonas vasicola pv. vasculorum (Cobb 1894) comb. nov. Causing Bacterial Leaf Streak of Corn in the United States. Phytopathology 107 11 1312-1321

Shidore, T, Broeckling, Corey D, Kirkwood, J S, Long, J J, Miao, J, Zhao, B, Leach, Jan E, Triplett, L R, (2017) The effector AvrRxo1 phosphorylates NAD in planta. PLoS pathogens 13 6 e1006442

Nagel, R, Turrini, P C, Nett, R S, Leach, Jan E, Verdier, V, Van Sluys, M A, Peters, R J, (2017) An operon for production of bioactive gibberellin A4 phytohormone with wide distribution in the bacterial rice leaf streak pathogen Xanthomonas oryzae pv. oryzicola. The New phytologist 214 3 1260-1266

Langlois, P A, Snelling, J, Hamilton, J P, Bragard, C, Koebnik, R, Verdier, V, Triplett, L R, Blom, J, Tisserat, Ned A, Leach, Jan E, (2017) Characterization of the Xanthomonas translucens Complex Using Draft Genomes, Comparative Genomics, Phylogenetic Analysis, and Diagnostic LAMP Assays. Phytopathology 107 5 519-527

Busby, P E, Soman, C, Wagner, M R, Friesen, M L, Kremer, J, Bennett, A, Morsy, M, Eisen, J A, Leach, Jan E, Dangl, J L, (2017) Research priorities for harnessing plant microbiomes in sustainable agriculture. PLoS biology 15 3 e2001793

Tanger, Paul, Klassen, S, Mojica, J P, Lovell, J T, Moyers, B T, Baraoidan, M, Naredo, M E, McNally, K L, Poland, J, Bush, Daniel R, Leung, H, Leach, Jan E, McKay, John K, (2017) Field-based high throughput phenotyping rapidly identifies genomic regions controlling yield components in rice. Scientific reports 7 42839

Triplett, Lindsay Renee, Cohen, Stephen Philip, Heffelfinger, C, Schmidt, C L, Huerta, A I, Tekete, C, Verdier, V, Bogdanove, A J, Leach, Jan E, (2016) A resistance locus in the American heirloom rice variety Carolina Gold Select is triggered by TAL effectors with diverse predicted targets and is effective against African strains of Xanthomonas oryzae pv. oryzicola. The Plant Journal 87 5 472-83

Triplett, Lindsay Renee, Shidore, T, Long, Jia Jun, Miao, J, Wu, S, Han, Q, Zhou, C, Ishihara, H, Li , J, Zhao, B, Leach, Jan E, (2016) AvrRxo1 Is a Bifunctional Type III Secreted Effector and Toxin-Antitoxin System Component with Homologs in Diverse Environmental Contexts. PLoS One 11 7 e0158856

Liu, Q, Yang, J, Zhang, S, Zhao, J, Feng, A, Yang, T, Wang, X, Mao, X, Dong, J, Zhu, X, Leung, H, Leach, Jan E, Liu, B, (2016) OsGF14e positively regulates panicle blast resistance in rice. Biochemical and Biophysical Research Communications 471 1 247-52

Vera Cruz, Casiana M, B, Cottyn, Nguyen, M H, Lang, Jillian M, Mew, T W, Leach, Jan E, (2016) "Detection of Xanthomonas oryzae pv. oryzae, and X. oryzae pv. oryzicola in rice seeds" APS Press

Triplett, Lindsay Renee, Leach, Jan E, (2016) Host resistance to TAL effectors: Thinking outside the UPT box. Physiological Molecular Plant Pathology

McCluskey, K, Alvarez, A, Bennett, R, Bokati, D, Boundy-Mills, K, Brown, D, Bull, C T, Coffey, M, Dreaden, T, Duke, C, Dye, G, Ehmke, E, Eversole, K, Fenstermacher, K, Geiser, D, Glaeser, J A, Greene, S, Gribble, L, Griffith, M P, Hanser, K, Humber, R, Johnson, B W, Kermode, A, Krichevsky, M, Laudon, M, Leach, Jan E, Leslie, J, May, M, Melcher, U, Nobles, D, Fonseca, N R, Robinson, S, Ryan, M, Scott, J, Silflow, C, Vidaver, A, Webb, K M, Wertz, J E, Yentsch, S, Zehr, S, (2016) The U.S. Culture Collection Network Lays the Foundation for Progress in Preservation of Valuable Microbial Resources. Phytopathology 106 6 532-40

Liu, Q, Yang, J, Zhang, S, Zhao, J, Feng, A, Yang, T, Wang, X, Mao, X, Dong, J, Zhu, X, Leung, H, Leach, Jan E, Liu, B, (2016) OsGF14b Positively Regulates Panicle Blast Resistance but Negatively Regulates Leaf Blast Resistance in Rice. Molecular Plant-Microbe Interactions : MPMI 29 1 46-56

Tanger, Paul, Vega-Sánchez, Miguel E, Fleming, Margaret Brigham, Tran, Kim, Singh, Seema, Abrahamson, James B, Jahn, Courtney Elaine, Santoro, Nicholas, Naredo, Elizabeth B, Baraoidan, Marietta, Danku, John M.C., Salt, David E, McNally, Kenneth L, Simmons, Blake A, Ronald, Pamela C, Leung, Hei, Bush, Daniel R, McKay, John K, Leach, Jan E, (2015) Cell Wall Composition and Bioenergy Potential of Rice Straw Tissues Are Influenced by Environment, Tissue Type, and Genotype BioEnergy Research 1-18

Han, Q, Zhou, C, Wu, S, Liu, Y, Triplett, Lindsey, Miao, J, Tokuhisa, J, Deblais, L, Robinson, H, Leach, Jan E, Li, J, Zhao, B Y, (2015) Crystal structure of the complex between Xanthomonas AvrRxo1-ORF1, a type III effector with a polynucleotide kinase domain, and its interactor AvrRxo1-ORF2 Structure 23 1900-1909

Wiersma, A.T., Gaines, Todd, Preston, C., Hamilton, J.P., Giacomini, D., Buell, C Robin, Leach, Jan E, Westra, Philip, (2015) Gene amplification of 5-enol-pyruvylshikimate-3-phosphate synthase in glyphosate-resistant Kochia scoparia Planta 241 463-474

Booher, N J, Carpenter, S C, Sebra, R P, Wang, L, Salzberg, S L, Leach, Jan E, Bogdanove, A J, (2015) Single molecule real-time sequencing of Xanthomonas oryzae genomes reveals a dynamic structure and complex TAL (transcription activator-like) effector gene relationships. Microbial Genomics 1 4

Goodyear, A, Kumar, A, Ehrhart, Eugene J, Swanson, K S, Grusak, M A, Leach, Jan E, Dow, Steven W, McClung, A, Ryan, Elizabeth P, (2015) "Dietary rice bran supplementation prevents Salmonella colonization differentially across varieties and by priming intestinal immunity" Journal of Functional Foods 18 A 653-664

Campillo, T, Luna, Emily Katrin, Portier, P, Fischer-Le Saux, M, Lapitan, Nora L, Tisserat, Ned A, Leach, Jan E, (2015) Erwinia iniecta sp. nov., isolated from Russian wheat aphid (Diuraphis noxia). International journal of systematic and evolutionary microbiology 65 10 3625-33

Tonnessen, Bradley William, Manosalva, P, Lang, Jillian M, Baraoidan, M, Bordeos, A, Mauleon, R, Oard, J, Hulbert, S, Leung, H, Leach, Jan E, (2015) Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance. Plant molecular biology 87 3 273-86

vanEck, L, Davidson, R, Wu, S, Zhao, B, Botha, A M, Leach, Jan E, Lapitan, N L, (2014) A WRKY53 transcriptional network in wheat revealed by genomics tools in rice Funtional and Integrated Genomics 14 351-362

Fory, P A, Triplett, Lindsay Renee, Ballen, C, Abello, J, Duitama, J, Aricapa, G, Prado, G A, Correa, F, Hamilton, J, Leach, Jan E, Tohme, J, Mosquera, G M, (2014) Comparative analysis of two emerging rice seed bacterial pathogens Phytopathology 104 436-44

Sundaram, R M, Chatterjee, S, Oliva, R, Laha, G S, Cruz, C V, Leach, Jan E, Sonti, R V, (2014) Update on Bacterial Blight of Rice: Fourth International Conference on Bacterial Blight. Rice (New York, N.Y.) 7 1 12

Sundaram, R M, Chatterjee, S, Oliva, R, Laha, G S, Cruz, C V, Leach, Jan E, Sonti, R V, (2014) Update on Bacterial Blight of Rice: Fourth International Conference on Bacterial Blight. Rice (New York, N.Y.) 7 1 12

Leach, Jan E, Leung, Hei, Tisserat, N A, (2014) "Disease and Resistance" Encyclopedia of Agriculture and Food Systems 4 360-374

Fletcher, J, Leach, Jan E, Eversole, K, Tauxe, R, (2014) Human Pathogens on Plants: Designing a Multidisciplinary Strategy for Research. Phytopathology PHYTO09120236IAtest

Fletcher, J, Leach, Jan E, Eversole, K, Tauxe, R, (2014) Human Pathogens on Plants: Designing a Multidisciplinary Strategy for Research. Phytopathology PHYTO09120236RVWtest

Zhao, J, Zhang, S, Yang, T, Zeng, Z, Huang, z, Wang, X, Liu, Q, Leach, Jan E, Leung, H, Liu, B, (2014) Global transcriptional profiling of a cold-tolerant rice cultivar under moderate cold stress reveals different cold stress response mechanisms Scandinavian Plant Physiology Society Epubl ahead of print

Yu, C, Chen, H, Tian, F, Leach, Jan E, He, C, (2014) Differentially-expressed genes in rice infected by Xanthomonas oryzae pv. oryzae relative to a flagellin-deficient mutant reveal potential functions of flagellin in host-pathogen interactions. Rice (New York, N.Y.) 7 1 20

Anderson, V A, Haley, Scott D, Peairs, Frank B, van Eck, L, Leach, Jan E, Lapitan, Nora L, (2014) Virus-induced gene silencing suggests (1,3;1,4)-β-glucanase is a susceptibility factor in the compatible russian wheat aphid-wheat interaction. Molecular plant-microbe interactions : MPMI 27 9 913-22

Lang, Jillian M, Langlois, P, Nguyen, M H, Triplett, Lindsay Renee, Purdie, L, Holton, T A, Djikeng, A, Vera Cruz, C M, Verdier, V, Leach, Jan E, (2014) Sensitive detection of Xanthomonas oryzae Pathovars oryzae and oryzicola by loop-mediated isothermal amplification. Applied and Environmental Microbiology 80 15 4519-30

Ash, G J, Lang, J M, Triplett, Lindsay Renee, Stodart, B J, Verdier, V, Vera Cruz, C, Rott, P, Leach, Jan E, (2014) Development of a genomics-based LAMP (Loop-1 mediated isothermal amplification) assay for detection of Pseudomonas fuscovaginae from rice Plant Disease/APS Press 98 909-915

Victoria, Valdez, Haley, Scott D, Peairs, Frank B, Leach, Jan E, Lapitan, Nora L, (2014) Virus-induced gene silencing suggests that (1,3;1,4)-β-glucanase is a susceptibility factor in the compatible Russian wheat aphid-wheat interaction. Mol. Plant-Microbe Int 27 913-922

Van Eck, L, Davidson, R M, Wu, S, Zhao, B Y, Botha, A M, Leach, Jan E, Lapitan, Nora L, (2014) The transcriptional network of WRKY53 in cereals links oxidative responses to biotic and abiotic stress inputs. Functional & integrative genomics 14 2 351-62

Liu, W, Liu, L, Triplett, Lindsay Renee, Leach, Jan E, Wang, G L, (2014) Novel instights into rice innate immunity against bacterial and fungal pathogens Annual Reviews of Phytopathology 52 213-241

Fory, P A, Triplett, L, Ballen, C, Abello, J F, Duitama, J, Aricapa, M G, Prado, G A, Correa, F, Hamilton, James Richard, Leach, Jan E, Tohme, J, Mosquera, G M, (2014) Comparative analysis of two emerging rice seed bacterial pathogens. Phytopathology 104 5 436-44

vanEck, L, Davidson, R, Wu, S, Zhao, B, Botha, Am, Leach, Jan E, Lapitan, Nora L, (2014) The transcriptional network of WRKY53 in cereals links oxidative responses to biotic and abiotic stress inputs Funct & Integr Genom 14 2 351-362

Liu, W, Liu, J, Triplett, L, Leach, Jan E, Wang, G L, (2014) Novel insights into rice innate immunity against bacterial and fungal pathogens. Annual review of phytopathology 52 213-41

Wonni, I, Cottyn, B, Detemmerman, L, Dao, S, Ouedraogo, L, Sarra , S, Tekete, C, Poussier , S, Corral, R, Triplett, Lindsay Renee, Koita, O, Koebnik, R, Leach, Jan E, Szurek , B, Maes, M, Verdier, V, (2013) Analysis of Xanthomonas oryzae pv. oryzicola population in Mali and Burkina Faso reveals a high level of genetic and pathogenic diversity Phytopathology epub ahead of print

van Alfen, N, Leach, Jan E, Lindow, Steven, (2013) "Annual Review of Phytopathology" Annual Reviews 51

Tanger, P, Field, J L, Jahn, Courtney Elaine, DeFoort, M, Leach, Jan E, (2013) Biomass for thermochemical conversion: targets and challenges. Frontiers in Plant Science 4 218

Liu, Y, Liu, B, Yang, J, Bordeos, A, Leach, Jan E, Wang, G, Leung, H, (2013) Fine-mapping and molecular marker development for Pi56(t), a NBS-LRR gene conferring broad-spectrum resistance to Magnaporthe oryzae in rice Theor Appl Genet 126 985-998

Fletcher, J, Leach, Jan E, Eversole, K, Tauxe, R, (2013) Human Pathogens on Plants: Designing a Multidisciplinary Strategy for Research Phytopathology 103 306-315

Boyd, L, Ridout, C, O'Sullivan, D, Leach, Jan E, Leung, H, (2013) Plant-pathogen interactions: disease resistance in modern agriculture Trends in Genetics online early: http://dx.doi.org/10.1016/j.tig.2012.10.011

Tanger, Paul, Field, J L, Jahn, Courtney Elaine, Defoort, M W, Leach, Jan E, (2013) Biomass for thermochemical conversion: targets and challenges. Frontiers in plant science 4 218

Liu, Y, Liu, B, Zhu, X, Yang, J, Bordeos, A, Wang, G, Leach, Jan E, Leung, H, (2013) Fine-mapping and molecular marker development for Pi56(t), a NBS-LRR gene conferring broad-spectrum resistance to Magnaporthe oryzae in rice. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 126 4 985-98

Fletcher, J, Leach, Jan E, Eversole, K, Tauxe, R, (2013) Human pathogens on plants: designing a multidisciplinary strategy for research. Phytopathology 103 4 306-15

Boyd, L A, Ridout, C, O'Sullivan, D M, Leach, Jan E, Leung, H, (2013) Plant-pathogen interactions: disease resistance in modern agriculture. Trends in genetics : TIG 29 4 233-40

(2012) Development of a variable number of tandem repeats (VNTR) typing scheme for the bacterial rice pathogen Xanthomonas oryzae pv oryzicola Phytopathology 102 948-956

(2012) Dietary rice bran promotes resistance to Salmonella enterica serovar Typhimurium colonization in mice BMC Microbiol, doi:10.1186/1471-2180-12-71 12 1 71

Kumar, A., Henderson, A., Forster, G. M., Goodyear, A. W., Weir, Tiffany L, Leach, Jan E, Dow, Steven W, Ryan, Elizabeth P, (2012) "Dietary rice bran promotes resistance to Salmonella enterica serovar Typhimurium colonization in mice" BMC Microbiol 12 71

Gaines, Todd, Ward, Sarah M, Bukun, B., Preston, C., Leach, Jan E, Westra, Philip, (2012) Interspecific hybridization transfers a previously unknown glyphosate resistance mechanism in Amaranthus species Evolutionary Applications 5 29-38

(2012) TAL effectors expressed individually targeting OsSWEET genes enhance virulence on diverse rice varieties when in a TAL effector-deficient strain of Xanthomonas oryzae New Phytologist, doi: 10.1111/j.1469-8137.2012.04367.x 196 1197-1207

Verdier, V, Triplett, L R, Hummel, A W, Corral, R, Cernadas, R A, Schmidt, C L, Bogdanove, A J, Leach, Jan E, (2012) Transcription activator-like (TAL) effectors targeting OsSWEET genes enhance virulence on diverse rice (Oryza sativa) varieties when expressed individually in a TAL effector-deficient strain of Xanthomonas oryzae. The New phytologist 196 4 1197-207

Zhao, S, Poulin, L, Rodriguez-R, L M, Serna, N F, Liu, S Y, Wonni, I, Szurek, B, Verdier, V, Leach, Jan E, He, Y Q, Feng, J X, Koebnik, R, (2012) Development of a variable number of tandem repeats typing scheme for the bacterial rice pathogen Xanthomonas oryzae pv. oryzicola. Phytopathology 102 10 948-56

Kumar, Anurag, Henderson, A, Forster, G M, Goodyear, A W, Weir, Tiffany L, Leach, Jan E, Dow, Steven W, Ryan, Elizabeth P, (2012) Dietary rice bran promotes resistance to Salmonella enterica serovar Typhimurium colonization in mice. BMC microbiology 12 71

Kumar, A, Henderson, A, Forster, G M, Goodyear, A W, Weir, Tiffany L, Leach, Jan E, Dow, Steven W, Ryan, Elizabeth P, (2012) Dietary rice bran promotes resistance to Salmonella enterica serovar Typhimurium colonization in mice. BMC microbiology 12 71

Verdier, V, Vera Cruz, C, Leach, Jan E, (2012) Controlling rice bacterial blight in Africa: needs and prospects. Journal of biotechnology 159 4 320-8

Gaines, Todd, Ward, Sarah M, Bukun, B, Preston, C, Leach, Jan E, Westra, Philip, (2012) Interspecific hybridization transfers a previously unknown glyphosate resistance mechanism in Amaranthus species. Evolutionary applications 5 1 29-38

(2011) Controlling rice bacterial blight in Africa: needs and prospects J Biotechnol 30;159(4):320-8 doi:101016/j

(2011) Crop genome sequencing: lessons and rationales Trends in Plant Sciences, doi: 10.1016/j.tplants.2010.10.005. 16 77-88

Gaines, Todd, Ward, Sarah M, Bukun, Bekir, Preston, Christopher, Leach, Jan E, Westra, Philip, (2011) Data from: Interspecific hybridization transfers a previously unknown glyphosate resistance mechanism in Amaranthus species

(2011) Dissecting quantitative resistance against blast disease using heterogeneous inbred family lines in rice Theor Appl Genet, DOI: 10.1007/s00122-010-1450-2 122 2 341-353

(2011) Genetic variation in biomass traits among 20 diverse rice varieties Plant Physiol 155 1 157- 68

(2011) "Genome analyses to understand durable disease resistance in rice" Genome-Enabled Integration of Research in Plant Pathogen Systems, T Wolpert, T Shiraishi, J Glazebrook,(eds), APS Press, Minneapolis, MN 73-79

(2011) "Genome-Enabled Integration of Research in Plant Pathogen Systems (Synopsis)" T Wolpert, T Shiraishi, J Glazebrook,(eds), APS Press, Minneapolis, MN 257-259

(2011) Genomic Analysis of Xanthomonas oryzae from US rice reveals substantial divergence from known X oryzae pathovars Appl Environ Microbiol 77 3930-3937

(2011) Interspecific hybridization transfers a previously unknown glyphosate resistance mechanism in Amaranthus species Evolutionary Applications, doi: 10.1111/j.1752-4571.2011.00204.x 5 29-38

(2011) Linkage illuminates a complex genome Nat Biotechnol, doi: 10.1038/nbt.1945 29 8 717-8

(2011) Mechanism of resistance of evolved glyphosate-resistant Palmer amaranth (Amaranthus palmeri L) J Agric Food Chem, dx.doi.org/10.1021/jf104719k 59 5886-5889

Gaines, Todd, Shaner, D. L., Ward, Sarah M, Leach, Jan E, Preston, C., Westra, Philip, (2011) Mechanism of resistance of evolved glyphosate-resistant Palmer amaranth (Amaranthus palmeri) Journal of Agricultural and Food Chemistry 59 5886-5889

(2011) Rice 14-3-3 protein (GF14e) affects cell death and disease resistance Plant J , doi: 10.1111/j.1365-313X.2011.04728.x 68 777-787

(2011) The Comprehensive Phytopathogen Genomics Resource: a web-based resource for data-mining plant pathogen genomes Database doi: 10.1093/database/bar053

(2011) Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp J Bacteriol 193 19 5450-64

Manosalva, P M, Bruce, M, Leach, Jan E, (2011) Rice 14-3-3 protein (GF14e) negatively affects cell death and disease resistance. The Plant journal : for cell and molecular biology 68 5 777-87

Bogdanove, A J, Koebnik, R, Lu, H, Furutani, A, Angiuoli, S V, Patil, P B, Van Sluys, M A, Ryan, R P, Meyer, D F, Han, S W, Aparna, G, Rajaram, M, Delcher, A L, Phillippy, A M, Puiu, D, Schatz, M C, Shumway, M, Sommer, D D, Trapnell, C, Benahmed, F, Dimitrov, G, Madupu, R, Radune, D, Sullivan, S, Jha, G, Ishihara, H, Lee, S W, Pandey, A, Sharma, V, Sriariyanun, M, Szurek, B, Vera-Cruz, C M, Dorman, K S, Ronald, P C, Verdier, V, Dow, J M, Sonti, R V, Tsuge, S, Brendel, V P, Rabinowicz, P D, Leach, Jan E, White, F F, Salzberg, S L, (2011) Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. Journal of bacteriology 193 19 5450-64

McKay, John K, Leach, Jan E, (2011) "Linkage illuminates a complex genome." Nature biotechnology 29 8 717-8

Gaines, Todd, Shaner, D L, Ward, Sarah M, Leach, Jan E, Preston, C, Westra, Philip, (2011) Mechanism of resistance of evolved glyphosate-resistant Palmer amaranth (Amaranthus palmeri). Journal of agricultural and food chemistry 59 11 5886-9

Triplett, L R, Hamilton, J P, Buell, C R, Tisserat, Ned A, Verdier, V, Zink, F, Leach, Jan E, (2011) Genomic analysis of Xanthomonas oryzae isolates from rice grown in the United States reveals substantial divergence from known X. oryzae pathovars. Applied and environmental microbiology 77 12 3930-7

Feuillet, C, Leach, Jan E, Rogers, J, Schnable, P S, Eversole, K, (2011) Crop genome sequencing: lessons and rationales. Trends in plant science 16 2 77-88

Jahn, Courtney Elaine, McKay, John K, Mauleon, R, Stephens, J, McNally, K L, Bush, Daniel R, Leung, H, Leach, Jan E, (2011) Genetic variation in biomass traits among 20 diverse rice varieties. Plant physiology 155 1 157-68

(2010) A benefit of high temperature New Phytol 185 568- 576

(2010) "Bioinformatic strategies for predicting candidate genes under disease resistance QTL" Phytopathology 100 S164

(2010) "Dissecting QTL: The genes that contribute to disease resistance revealed" Phytopathology 100 S157

(2010) Gene amplification confers glyphosate resistance in Amaranthus palmeri P Natl Acad Sci USA 107 1029-1034

Gaines, Todd, Zhang, W., Wang, D., Bukun, B., Chisholm, Stephen T, Shaner, D. L., Nissen, Scott J, Patzoldt, W. L., Tranel, P. J., Culpepper, A. S., Grey, T. L., Webster, T. M., Vencill, W. K., Sammons, R. D., Jiang, J.M., Preston, C., Leach, Jan E, Westra, Philip, (2010) Gene amplification confers glyphosate resistance in Amaranthus palmeri Proceedings of the National Academy of Sciences of the United States of America 107 3 1029-1034

(2010) "Genetic Variation In Biomass Traits Among 20 Diverse Rice Varieties" Plant and Animal Genome XVIII SanDiego, CA January 9-13 http://www.intl- pag.org/18/abstracts/P05b_PAGXVIII_241.html

(2010) "Genomewide SNP Patterns In Rice Reveal Historical And Recent Introgressions" Plant and Animal Genome XVIII SanDiego, CA January 9-13 http://wwwintl- pagorg/18/abstracts/W18_PAGXVIII_140html

(2010) "Genomics-based diagnostic marker development for bacterial plant pathogens" Symposium presentation at the 12th International Conference on Plant Pathogenic Bacteria, St Denis, La Reunion, France June 7- 11 http://www.icppb2010.org/

(2010) Genomics-Based Diagnostic Marker Development for Xanthomonas oryzae pv oryzae and X oryzae pv oryzicola Plant Dis 94 311-319

(2010) "Looking ahead in genomics of plant-associated microbes" Phytopathology 100 S167

Heuberger, Adam, Lewis, M. R., Chen, M. H., Brick, Mark A, Leach, Jan E, Ryan, Elizabeth P, (2010) "Metabolomic and functional genomic analyses reveal varietal differences in bioactive compounds of cooked rice" PLoS One 5 9 e12915

(2010) Rice Germin-like proteins: Allelic diversity and relationships to early stress responses RICE, DOI: 10.1007/s12284-010-9038-7 3 43-55

(2010) "Screening a diverse set of rice varieties for variation in biomass and resistance to plant disease" Poster presentation at the 10th Japan- US Seminar: Genome-Enabled Integration of Research in Plant Pathogen Systems January 24- 28, Corvallis, OR

(2010) "Sequence data of Xanthomonas strains isolated from US rice fields reveals substantial divergence from Xanthomonas oryzae pvs oryzae and oryzicola" Phytopathology 100 S127

(2010) "Understanding The Genetic Architecture Of Broad-Spectrum Disease Resistance Through Genome Scans Of Rice Mutants" Plant and Animal Genome XVIII SanDiego, CA January 9-13 http://wwwintl- pagorg/18/abstracts/W36_PAGXVIII_282html

(2010) Variation in gene expression of Andropogon gerardii in response to altered environmental conditions associated with climate change J Ecol 98 374- 383

(2010) Virus- induced gene silencing of WRKY53 and an inducible phenylalanine ammonia-lyase in wheat reduces aphid resistance Plant Biotechnol J, doi: 101111/j.1467-7652.2010.00539.x. 8 9 1023-32

Van Eck, L, Schultz, T, Leach, Jan E, Scofield, S R, Peairs, Frank B, Botha, A M, Lapitan, Nora L, (2010) Virus-induced gene silencing of WRKY53 and an inducible phenylalanine ammonia-lyase in wheat reduces aphid resistance. Plant biotechnology journal 8 9 1023-32

Heuberger, Adam, Lewis, M R, Chen, Mingxuan, Brick, Mark A, Leach, Jan E, Ryan, Elizabeth P, (2010) Metabolomic and functional genomic analyses reveal varietal differences in bioactive compounds of cooked rice. PloS one 5 9 e12915

Heuberger, Adam, Lewis, M R, Chen, M H, Brick, Mark A, Leach, Jan E, Ryan, Elizabeth P, (2010) Metabolomic and functional genomic analyses reveal varietal differences in bioactive compounds of cooked rice. PloS one 5 9 e12915

Lang, Jillian M, Hamilton, John P., Diaz, Maria Genaleen, Van Sluys, Marie Anne, Burgos, Ma. Ruby, Vera Cruz, Casiana M., Buell, C. Robin, Tisserat, Ned A, Leach, Jan E, (2010) Genomics-Based Diagnostic Marker Development forXanthomonas oryzaepv.oryzaeandX. oryzaepv.oryzicola Plant Disease 94 3 311-319

Gaines, Todd, Zhang, W, Wang, D, Bukun, B, Chisholm, Stephen T, Shaner, D L, Nissen, Scott J, Patzoldt, W L, Tranel, P J, Culpepper, A S, Grey, T L, Webster, T M, Vencill, W K, Sammons, R D, Jiang, J, Preston, C, Leach, Jan E, Westra, Philip, (2010) Gene amplification confers glyphosate resistance in Amaranthus palmeri. Proceedings of the National Academy of Sciences of the United States of America 107 3 1029-34

Webb, K M, Oña, I, Bai, J, Garrett, K A, Mew, T, Vera Cruz, C M, Leach, Jan E, (2010) A benefit of high temperature: increased effectiveness of a rice bacterial blight disease resistance gene. The New phytologist 185 2 568-76

(2009) A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice Plant Physiol 149 286-296

(2009) Accumulating candidate genes for broad-spectrum resistance to rice blast in a drought-tolerant rice cultivar Phytopathology 99 S19-S19

(2009) Detection of genomic deletions in rice using oligonucleotide microarrays Bmc Genomics 10

(2009) Genomewide SNP variation reveals relationships among landraces and modern varieties of rice P Natl Acad Sci USA 106 12273-12278

(2009) Genomics based diagnostic marker development for Xanthomonas oryzae pv oryzae and X oryzae pv oryzicola Phytopathology 99 S69-S69

(2009) Germins Plant Sci 177 499-510

McNally, K L, Childs, K L, Bohnert, R, Davidson, R M, Zhao, K, Ulat, V J, Zeller, G, Clark, R M, Hoen, D R, Bureau, T E, Stokowski, R, Ballinger, D G, Frazer, K A, Cox, D R, Padhukasahasram, B, Bustamante, C D, Weigel, D, Mackill, D J, Bruskiewich, R M, Rätsch, G, Buell, C R, Leung, H, Leach, Jan E, (2009) Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America 106 30 12273-8

Bruce, M, Hess, A, Bai, J, Mauleon, R, Diaz, M G, Sugiyama, N, Bordeos, A, Wang, G L, Leung, H, Leach, Jan E, (2009) Detection of genomic deletions in rice using oligonucleotide microarrays. BMC genomics 10 129

Manosalva, P M, Davidson, R M, Liu, B, Zhu, X, Hulbert, S H, Leung, H, Leach, Jan E, (2009) A germin-like protein gene family functions as a complex quantitative trait locus conferring broad-spectrum disease resistance in rice. Plant physiology 149 1 286-96

(2008) Acquisition and Evolution of Plant Pathogenesis-Associated Gene Clusters and Candidate Determinants of Tissue-Specificity in Xanthomonas Plos One 3

(2008) Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches Bmc Genomics 9

Cheung, Foo, Win, Joe, Lang, Jillian M, Hamilton, John, Vuong, Hue, Leach, Jan E, Kamoun, Sophien, André Lévesque, C, Tisserat, Ned A, Buell, C Robin, (2008) Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches BMC Genomics 9 1 542

(2008) Diverse bacterial plant pathogens contain homologs of the Xanthomonas oryzae pv oryzicola avrRxo1 effector gene Phytopathology 98 S71-S72

(2008) Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv oryzae PXO99(A) Bmc Genomics 9

(2008) Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv oryzae PXO99(A) (vol 9, pg 534, 2008) Bmc Genomics 9 534

(2008) Phylogeny, function and structure of rice oxalate oxidases Phytopathology 98 S31-S31

(2008) Rice lesion mimic mutants with enhanced resistance to diseases Mol Genet Genomics 279 605-619

(2008) Sequence polymorphisms confer differential allele regulation of germin-like protein gene family members associated with rice blast QTL Phytopathology 98 S44-S44

Cheung, F, Win, J, Lang, Jillian M, Hamilton, James Richard, Vuong, H, Leach, Jan E, Kamoun, S, André Lévesque, C, Tisserat, Ned A, Buell, C R, (2008) Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches. BMC genomics 9 542

Wu, C, Bordeos, A, Madamba, M R, Baraoidan, M, Ramos, M, Wang, G L, Leach, Jan E, Leung, H, (2008) Rice lesion mimic mutants with enhanced resistance to diseases. Molecular genetics and genomics : MGG 279 6 605-19

Salzberg, S L, Sommer, D D, Schatz, M C, Phillippy, A M, Rabinowicz, P D, Tsuge, S, Furutani, A, Ochiai, H, Delcher, A L, Kelley, D, Madupu, R, Puiu, D, Radune, D, Shumway, M, Trapnell, C, Aparna, G, Jha, G, Pandey, A, Patil, P B, Ishihara, H, Meyer, D F, Szurek, B, Verdier, V, Koebnik, R, Dow, J M, Ryan, R P, Hirata, H, Tsuyumu, S, Won Lee, S, Seo, Y S, Sriariyanum, M, Ronald, P C, Sonti, R V, Van Sluys, M A, Leach, Jan E, White, F F, Bogdanove, A J, (2008) Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A. BMC genomics 9 204

Hoffmann, D S, Weydert, C J, Lazartigues, E, Kutschke, W J, Kienzle, M F, Leach, Jan E, Sharma, J A, Sharma, R V, Davisson, R L, (2008) Chronic tempol prevents hypertension, proteinuria, and poor feto-placental outcomes in BPH/5 mouse model of preeclampsia. Hypertension (Dallas, Tex. : 1979) 51 4 1058-65

Lu, H, Patil, P, Van Sluys, M A, White, F F, Ryan, R P, Dow, J M, Rabinowicz, P, Salzberg, S L, Leach, Jan E, Sonti, R, Brendel, V, Bogdanove, A J, (2008) Acquisition and evolution of plant pathogenesis-associated gene clusters and candidate determinants of tissue-specificity in xanthomonas. PloS one 3 11 e3828

(2007) Detection of deletion mutants in rice via ergo hybridization onto membrane spotted arrays Plant Mol Biol Rep 25 17-26

(2007) Development of diagnostic molecular markers for rapid identification of Xanthomonas oryzae pv oryzae and X-oryzae pv oryzicola using conventional and multiplex PCR Phytopathology 97 S61-S61

(2007) Dissection of Rxo1-mediated defense signaling in cereals Phytopathology 97 S106-S106

(2007) Ecological genomics Front Ecol Environ 5 19-24

(2007) Phylogenomic analyses of rice oxalate oxidases, candidate genes for quantitative resistance to rice blast Phytopathology 97 S18-S18

(2007) Rust and drought effects on gene expression and phytohormone concentration in the dominant species of tallgrass prairie Phytopathology 97 S36-S36

(2007) Translational genomics for bioenergy production Plant Cell 19 2971-2973

Bush, Daniel R, Leach, Jan E, (2007) Translational genomics for bioenergy production: There’s room for more than one model PLANT CELL 19 10 2971-2973

Bush, Daniel R, Leach, Jan E, (2007) "Translational genomics for bioenergy production: there's room for more than one model." The Plant cell 19 10 2971-3; author reply 2973

(2006) Drought and rust effects on gene expression in the dominant plant species of tallgrass prairie, Andropogon gerardii Phytopathology 96 S37-S37

(2006) Ecological genomics and epidemiology Eur J Plant Pathol 115 35-51

(2006) Genetic background of Xandhomonas oryzae pv oryzae strains influences the function of specific avirulence genes Phytopathology 96 S121-S121

(2006) Sequencing multiple and diverse rice varieties Connecting whole-genome variation with phenotypes Plant Physiol 141 26-31

(2006) Suppression of defense response in plants by the avrBs3/pthA gene family of Xanthomonas spp Mol Plant Microbe In 19 342-349

(2006) Three new Xanthomonas genome sequences and comparative analyses of pathogenesis associated gene clusters Phytopathology 96 S70-S71

McNally, K L, Bruskiewich, R, Mackill, D, Buell, C R, Leach, Jan E, Leung, H, (2006) Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes. Plant physiology 141 1 26-31

Fujikawa, T, Ishihara, H, Leach, Jan E, Tsuyumu, S, (2006) Suppression of defense response in plants by the avrBs3/pthA gene family of Xanthomonas spp. Molecular plant-microbe interactions : MPMI 19 3 342-9

(2005) Identification and characterization of IS1112 and IS1113 insertion element sequences in Xanthomonas oryzae pv oryzae DNA Sequence 16 75-79

(2005) Utilization of simply-inherited components of nonhost resistance Phytopathology 95 S137-S137

Ryba-White, M, Sakthivel, N, Yun, C, White, F, Leach, Jan E, (2005) Identification and characterization of IS1112 and IS1113 insertion element sequences in Xanthomonas oryzae pv. oryzae. DNA sequence : the journal of DNA sequencing and mapping 16 1 75-9

(2004) Approaches to achieve durable disease resistance in rice Phytopathology 94 S135-S135

(2004) Association between molecular markers and blast resistance in an advanced backcross population of rice Theor Appl Genet 108 1024-1032

(2004) Detection of deletion mutants in spotted arrays Phytopathology 94 S90-S90

(2004) Isolation of bacteria identified in the rice genome sequence Phytopathology 94 S65-S66

(2004) Looking ahead in rice disease research and management Crit Rev Plant Sci 23 103-127

(2004) Molecular characterization of the avrXa7 locus from Xanthomonas oryzae pv oryzae field isolates Physiol Mol Plant P 64 145-153

(2004) Rice bacterial blight resistance genes Xa7, xa5, and Xa4 confer resistance during all developmental stages Phytopathology 94 S61-S62

(2004) The avrRxo1 gene from the rice pathogen Xanthomonas oryzae pv oryzicola confers a nonhost Defense reaction on maize with resistance gene Rxo1 Mol Plant Microbe In 17 771-779

(2004) The Rxo1/Rba1 locus of maize controls resistance reactions to pathogenic and non-host bacteria Theor Appl Genet 109 71-79

Yang, M H, Zheng, Z, Leach, Jan E, (2004) [Cellular responses of rice to Magnaporthe grisea at the early stages of disease development]. Shi yan sheng wu xue bao 37 5 344-50

Zhao, B, Ardales, E Y, Raymundo, A, Bai, J, Trick, H N, Leach, Jan E, Hulbert, S H, (2004) The avrRxo1 gene from the rice pathogen Xanthomonas oryzae pv. oryzicola confers a nonhost defense reaction on maize with resistance gene Rxo1. Molecular plant-microbe interactions : MPMI 17 7 771-9

Zhao, B Y, Ardales, E, Brasset, E, Claflin, L E, Leach, Jan E, Hulbert, S H, (2004) The Rxo1/ Rba1 locus of maize controls resistance reactions to pathogenic and non-host bacteria. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 109 1 71-9

Wu, J L, Sinha, P K, Variar, M, Zheng, K L, Leach, Jan E, Courtois, B, Leung, H, (2004) Association between molecular markers and blast resistance in an advanced backcross population of rice. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 108 6 1024-32

(2003) A plant-associated microbe genome initiative Phytopathology 93 524-527

(2003) Bacterial effectors in plant disease and defense Plant Dis 87 1272-1282

(2003) Candidate Defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice Mol Plant Microbe In 16 14-24

(2003) Functional analysis of the 3 ' end of avrBs3/pthA genes from two Xanthomonas species Physiol Mol Plant P 63 329-338

(2003) High phosphorylase activity is correlated with increased potato minituber formation and starch content during extended clinorotation Adv Space Res 31 2245-2251

(2003) Rice phospholipase D isoforms show differential cellular location and gene induction Plant Cell Physiol 44 1013-1026

McGee, J D, Roe, J L, Sweat, T A, Wang, X, Guikema, J A, Leach, Jan E, (2003) Rice phospholipase D isoforms show differential cellular location and gene induction. Plant & cell physiology 44 10 1013-26

Leach, Jan E, Gold, S, Tolin, S, Eversole, K, (2003) A plant-associated microbe genome initiative. Phytopathology 93 5 524-7

Ramalingam, J, Vera Cruz, C M, Kukreja, K, Chittoor, J M, Wu, J L, Lee, S W, Baraoidan, M, George, M L, Cohen, M B, Hulbert, S H, Leach, Jan E, Leung, H, (2003) Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice. Molecular plant-microbe interactions : MPMI 16 1 14-24

Nedukha, O M, Schnyukova, E I, Leach, Jan E, (2003) High phosphorylase activity is correlated with increased potato minituber formation and starch content during extended clinorotation. Advances in space research : the official journal of the Committee on Space Research (COSPAR) 31 10 2245-51

(2002) Diversity in nucleotide binding site-leucine-rich repeat genes in cereals Genome Res 12 1871-1884

(2002) Future prospects for developing disease resistant plants Transgenic Res 11 597-598

(2002) Plant-associated microbe genome initiative Asm News 68 529-529

Bai, J, Pennill, L A, Ning, J, Lee, S W, Ramalingam, J, Webb, C A, Zhao, B, Sun, Q, Nelson, J C, Leach, Jan E, Hulbert, S H, (2002) Diversity in nucleotide binding site-leucine-rich repeat genes in cereals. Genome research 12 12 1871-84

Leach, Jan E, Shah, J, (2002) Future prospects for developing disease resistant plants. Transgenic research 11 6 597-8

Kerley, S J, Norgaard, C, Leach, Jan E, Christiansen, J L, Huyghe, C, Römer, P, (2002) The development of potential screens based on shoot calcium and iron concentrations for the evaluation of tolerance in Egyptian genotypes of white lupin (Lupinus albus L.) to limed soils. Annals of botany 89 3 341-9

(2001) Diagnostic primers for the detection of Xanthomonas oryzae pv oryzicola Philipp Agric Sci 84 408-418

(2001) Dissection of defence response pathways in rice Novart Fdn Symp 236 190-204

(2001) Growth in microgravity increases susceptibility of soybean to a fungal pathogen Plant Cell Physiol 42 657-664

(2001) Pathogen fitness penalty as a predictor of durability of disease resistance genes Annu Rev Phytopathol 39 187-224

(2001) Trafficking of plant defense response compounds Philipp Agric Sci 84 240-250

(2001) Vascular defense responses in rice Mol Plant Microbe In 14 1411-1419

Hilaire, E, Young, S A, Willard, L H, McGee, J D, Sweat, T, Chittoor, J M, Guikema, J A, Leach, Jan E, (2001) Vascular defense responses in rice: peroxidase accumulation in xylem parenchyma cells and xylem wall thickening. Molecular plant-microbe interactions : MPMI 14 12 1411-9

Ryba-White, M, Nedukha, O, Hilaire, E, Guikema, J A, Kordyum, E, Leach, Jan E, (2001) Growth in microgravity increases susceptibility of soybean to a fungal pathogen. Plant & cell physiology 42 6 657-64

Leach, Jan E, Ryba-White, M, Sun, Q, Wu, C J, Hilaire, E, Gartner, C, Nedukha, O, Kordyum, E, Keck, M, Leung, H, Guikema, J A, (2001) Plants, plant pathogens, and microgravity--a deadly trio. Gravitational and space biology bulletin : publication of the American Society for Gravitational and Space Biology 14 2 15-23

Leach, Jan E, Leung, H, Wang, G L, (2001) Dissection of defence response pathways in rice. Novartis Foundation symposium 236 190-200; discussion 200-4

Leach, Jan E, Vera Cruz, C M, Bai, J, Leung, H, (2001) Pathogen fitness penalty as a predictor of durability of disease resistance genes. Annual review of phytopathology 39 187-224

(2000) Predicting durability of a disease resistance gene based on an assessment of the fitness loss and epidemiological consequences of avirulence gene mutation P Natl Acad Sci USA 97 13500-13505

(2000) Xanthomonas oryzae pv oryzae avirulence genes contribute differently and specifically to pathogen aggressiveness Mol Plant Microbe In 13 1322-1329

Vera Cruz, C M, Bai, J, Ona, I, Leung, H, Nelson, R J, Mew, T W, Leach, Jan E, (2000) Predicting durability of a disease resistance gene based on an assessment of the fitness loss and epidemiological consequences of avirulence gene mutation. Proceedings of the National Academy of Sciences of the United States of America 97 25 13500-5

Bai, J, Choi, S H, Ponciano, G, Leung, H, Leach, Jan E, (2000) Xanthomonas oryzae pv. oryzae avirulence genes contribute differently and specifically to pathogen aggressiveness. Molecular plant-microbe interactions : MPMI 13 12 1322-9

(1999) Analysis of DNA polymorphism and virulence in Philippine strains of Xanthomonas oryzae pv oryzicola Plant Dis 83 434-440

(1999) Genomic manning of defense response genes in wheat Theor Appl Genet 98 226-233

(1999) Genotypic and pathotypic diversity in Xanthomonas oryzae pv oryzae in Nepal Phytopathology 89 687-694

Adhikari, T B, Mew, T W, Leach, Jan E, (1999) Genotypic and Pathotypic Diversity in Xanthomonas oryzae pv. oryzae in Nepal. Phytopathology 89 8 687-94

(1998) Distribution of Xanthomonas oryzae pv oryzae DNA modification systems in Asia Appl Environ Microb 64 1663-1668

(1998) Epidemic development of bacterial blight on rice carrying resistance genes Xa-4, Xa-7, and Xa-10 Plant Dis 82 1337-1340

Nedukha, O M, Leach, Jan E, Ryba-White, M, Hilaire, E, Guikema, J, Kordyum, E L, (1998) Effects of microgravity on the susceptibility of soybean to Phytophthora sojae. Journal of gravitational physiology : a journal of the International Society for Gravitational Physiology 5 1 P143-4

Choi, S H, Vera Cruz, C M, Leach, Jan E, (1998) Distribution of Xanthomonas oryzae pv. oryzae DNA modification systems in Asia. Applied and environmental microbiology 64 5 1663-8

(1997) Differential induction of a peroxidase gene family during infection of rice by Xanthomonas oryzae pv oryzae Mol Plant Microbe In 10 861-871

(1997) Genomic variability of the Xanthomonas pathovar mangiferaeindicae, agent of mango bacterial black spot Appl Environ Microb 63 246-253

(1997) Movement of Xanthomonas oryzae pv oryzae in southeast Asia detected using PCR-based DNA fingerprinting Phytopathology 87 302-309

Chittoor, J M, Leach, Jan E, White, F F, (1997) Differential induction of a peroxidase gene family during infection of rice by Xanthomonas oryzae pv. oryzae. Molecular plant-microbe interactions : MPMI 10 7 861-71

George, M L, Bustamam, M, Cruz, W T, Leach, Jan E, Nelson, R J, (1997) Movement of Xanthomonas oryzae pv. oryzae in Southeast Asia Detected Using PCR-Based DNA Fingerprinting. Phytopathology 87 3 302-9

Gagnevin, L, Leach, Jan E, Pruvost, O, (1997) Genomic Variability of the Xanthomonas Pathovar mangiferaeindicae, Agent of Mango Bacterial Black Spot. Applied and environmental microbiology 63 1 246-53

(1996) Bacterial avirulence genes Annu Rev Phytopathol 34 153-179

(1996) Changes in the plasma membrane distribution of rice phospholipase D during resistant interactions with Xanthomonas oryzae pv oryzae Plant Cell 8 1079-1090

(1996) Genes and proteins involved in aggressiveness and avirulence of Xanthomonas oryzae pv oryzae to rice Phytopathology 87 191-196

(1996) Hierarchical analysis of spatial variation of the rice bacterial blight pathogen across diverse agroecosystems in the Philippines Phytopathology 86 241-252

(1996) Induction of defense responses in rice Annu Rev Phytopathol 34 115-128

(1996) Measurement of haplotypic variation in Xanthomonas oryzae within a single field by rep-PCR and RFLP analyses Phytopathology 86 1352-1359

Young, S A, Wang, X, Leach, Jan E, (1996) Changes in the Plasma Membrane Distribution of Rice Phospholipase D during Resistant Interactions with Xanthomonas oryzae pv oryzae. The Plant cell 8 6 1079-1090

Leach, Jan E, White, F F, (1996) Bacterial avirulence genes. Annual review of phytopathology 34 153-79

(1995) A Homolog of an Escherichia-Coli Phosphate-Binding Protein Gene from Xanthomonas-Oryzae Pv Oryzae DNA Sequence 5 299-305

(1995) Application Method Affects the Distribution and Efficacy of Rhizobacteria Suppressive of Downy Brome (Bromus-Tectorum) Soil Biol Biochem 27 1271-1278

(1995) Genetic Diversity of Xanthomonas-Oryzae Pv Oryzae in Asia Appl Environ Microb 61 966-971

(1995) Population Biology of Xanthomonas-Oryzae Pv Oryzae and Approaches to Its Control Curr Opin Biotech 6 298-304

(1995) Rice Cationic Peroxidase Accumulates in Xylem Vessels during Incompatible Interactions with Xanthomonas-Oryzae Pv Oryzae Plant Physiol 107 1333-1341

Young, S A, Guo, A, Guikema, J A, White, F F, Leach, Jan E, (1995) Rice cationic peroxidase accumulates in xylem vessels during incompatible interactions with Xanthomonas oryzae pv oryzae. Plant physiology 107 4 1333-41

Adhikari, T B, Cruz, C, Zhang, Q, Nelson, R J, Skinner, D Z, Mew, T W, Leach, Jan E, (1995) Genetic Diversity of Xanthomonas oryzae pv. oryzae in Asia. Applied and environmental microbiology 61 3 966-71

Hopkins, C M, White, F F, Heaton, L A, Guikema, J A, Leach, Jan E, (1995) A homolog of an Escherichia coli phosphate-binding protein gene from Xanthomonas oryzae pv. oryzae. DNA sequence : the journal of DNA sequencing and mapping 5 5 299-305

(1994) Analysis of the Interaction between Xanthomonas-Oryzae Pv Oryzae and the Rice Cultivars Ir24 and Irbb21 Phytopathology 84 392-397

(1994) Avrxa10 Protein Is in the Cytoplasm of Xanthomonas-Oryzae Pv Oryzae Mol Plant Microbe In 7 799-804

(1994) Identification of an Avirulence Gene Family in Xanthomonas-Oryzae Pv Oryzae Colloq Inra 66 441-446

(1994) Identification of the Xorii Methyltransferase Gene and a Vsr Homolog from Xanthomonas-Oryzae Pv Oryzae Mol Gen Genet 244 383-390

(1994) Relationship between Phylogeny and Pathotype for the Bacterial-Blight Pathogen of Rice Appl Environ Microb 60 3275-3283

Young, S A, White, F F, Hopkins, C M, Leach, Jan E, (1994) AVRXa10 protein is in the cytoplasm of Xanthomonas oryzae pv. oryzae. Molecular plant-microbe interactions : MPMI 7 6 799-804

Nelson, R J, Baraoidan, M R, Cruz, C M, Yap, I V, Leach, Jan E, Mew, T W, Leung, H, (1994) Relationship between Phylogeny and Pathotype for the Bacterial Blight Pathogen of Rice. Applied and environmental microbiology 60 9 3275-83

Choi, S H, Leach, Jan E, (1994) Identification of the XorII methyltransferase gene and a vsr homolog from Xanthomonas oryzae pv. oryzae. Molecular & general genetics : MGG 244 4 383-90

(1993) A Family of Avirulence Genes from Xanthomonas-Oryzae Pv Oryzae Is Involved in Resistant Interactions in Rice Curr Plant Sci Biot 14 221-230

(1993) Effect of Light on Incompatible Interactions between Xanthomonas-Oryzae Pv Oryzae and Rice Physiol Mol Plant P 42 413-425

(1993) Focus on Bacterial-Blight of Rice Plant Dis 77 12-May

(1992) Assessment of Genetic Diversity and Population-Structure of Xanthomonas-Oryzae Pv Oryzae with a Repetitive DNA Element Appl Environ Microb 58 2188-2195

(1992) Identification of a Family of Avirulence Genes from Xanthomonas-Oryzae Pv Oryzae Mol Plant Microbe In 5 451-459

(1992) Increased Activity of a Cationic Peroxidase Associated with an Incompatible Interaction between Xanthomonas-Oryzae Pv Oryzae and Rice (Oryza-Sativa) Plant Physiol 99 1044-1050

Hopkins, C M, White, F F, Choi, S H, Guo, A, Leach, Jan E, (1992) Identification of a family of avirulence genes from Xanthomonas oryzae pv. oryzae. Molecular plant-microbe interactions : MPMI 5 6 451-9

Leach, Jan E, Rhoads, M L, Vera Cruz, C M, White, F F, Mew, T W, Leung, H, (1992) Assessment of genetic diversity and population structure of Xanthomonas oryzae pv. oryzae with a repetitive DNA element. Applied and environmental microbiology 58 7 2188-95

Reimers, P J, Guo, A, Leach, Jan E, (1992) Increased Activity of a Cationic Peroxidase Associated with an Incompatible Interaction Between Xanthomonas oryzae pv oryzae and Rice (Oryza sativa). Plant physiology 99 3 1044-50

(1991) Characterization of Strains of Xanthomonas-Campestris Pv Holcicola by Page of Membrane-Proteins and by Rea and Rflp Analysis of Genomic DNA Plant Dis 75 32-36

(1991) Race-Specific Resistance to Xanthomonas-Oryzae Pv Oryzae Conferred by Bacterial-Blight Resistance Gene Xa-10 in Rice (Oryza-Sativa) Involves Accumulation of a Lignin-Like Substance in Host Tissues Physiol Mol Plant P 38 39-55

(1990) A Repetitive DNA-Sequence Differentiates Xanthomonas-Campestris Pv Oryzae from Other Pathovars of Xanthomonas-Campestris Mol Plant Microbe In 3 238-246

(1990) Purification of a Cultivar-Specific Toxin from Pyrenophora-Tritici-Repentis, Causal Agent of Tan Spot of Wheat Mol Plant Microbe In 3 221-224

(1989) Examination of Rice Hydathode Water Pores Exposed to Xanthomonas-Campestris Pv Oryzae Phytopathology 79 433-436

(1989) Growth Dynamics of Xanthomonas-Campestris Pv Oryzae in Leaves of Rice Differential Cultivars Phytopathology 79 573-578

(1989) Identification of Low-Virulence Strains of Xanthomonas-Campestris Pv Oryzae from Rice in the United-States Phytopathology 79 984-990

(1989) Pseudomonas-Avenae, Causal Agent of Bacterial Leaf Stripe of Pearl-Millet Plant Dis 73 1010-1014

(1987) Dot-Immunobinding Assay for Detecting Xanthomonas-Campestris Pv Holcicola in Sorghum Plant Dis 71 30-33

(1987) Examination of Hydathode Water Pore Plugging in Rice Exposed to Compatible and Incompatible Xanthomonas-Campestris Pv Oryzae Races Phytopathology 77 1750-1750

(1987) Extracellular Protease of Erwinia-Carotovora Subsp Carotovora - Characterization and Involvement in Soft-Rot Pathogenesis Phytopathology 77 1736-1736

(1987) Pseudomonas-Avenae, the Causal Agent of Bacterial Leaf Stripe of Pearl-Millet in Nigeria Phytopathology 77 1766-1766

(1987) Restriction Fragment Length Polymorphism Analysis of the Xanthomonas-Campestris Pv Oryzae Genome for Differentiation of Races Phytopathology 77 1767-1767

(1986) Involvement of a Toxin in the Symptomatology of Tan Spot of Wheat Phytopathology 76 1125-1125

(1986) Mechanisms for Resistance of Rice to Xanthomonas-Campestris Pv Oryzae - Reinducible Plugging of Water Pores J Cell Biochem 76 20-20

(1986) Populations of Xanthomonas-Campestris Pv Oryzae in Differential Rice (Oryza-Sativa-L) Cultivars Phytopathology 76 1140-1140

Leach, Jan E, Cantrell, M A, Sequeira, L, (1982) Hydroxyproline-rich bacterial agglutinin from potato : extraction, purification, and characterization. Plant physiology 70 5 1353-8

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